tfNet repositories

  narrowPeak   NA

Transcription Factors including DnaseI*

Filtered Original
Cell Line
All
Enhancer
Heterochromatin
Insulator
Mixed
Promoter
Repetitive
Repressed
Transcribed
All
Enhancer
Heterochromatin
Insulator
Mixed
Promoter
Repetitive
Repressed
Transcribed
Colorectal  
Drosophila Melanogaster  
Gm12878                  
H1hesc                  
Helas3  
Hepg2                  
K562                  
Mus Musculus C2C12  
Mus Musculus CH12.LX  
Mus Musculus ES-E14  
Mus Musculus MEL  
Mus Musculus Myocyte  
Prostate  

*the table contains all putative regulatory regions detected by the tfNet tool (Diamanti et al., 2016). The reported regulatory regions marked as filtered contain at least 2 TF signals or one TF signal and one DNaseI signal, while the ones marked as original contain also single peak regions. In the following link you can download all the other data types (e.g. xml, statistics). Under the same link you can download putative regulatory regions for which DNaseI was not included their detection pipeline.